malaria

Nature Medicine 2025: global pfhrp2/3 deletion risk

Our Nature Medicine paper modelling global pfhrp2/3 deletion selection and spread risk.

hrpup

R package and workflow for pfhrp2/3 deletion risk and policy-oriented malaria analyses.

hmmIBDr

Rcpp implementation of [hmmIBD](https://github.com/glipsnort/hmmIBD).

hrp2malaRia

Individual based malaria transmission model for the study of P. falciparum pfhrp2 gene deletions

icer

Infection composition estimation in R

McCOILR

Rcpp implementation of [THEREALMcCOIL](https://github.com/Greenhouse-Lab/THEREALMcCOIL).

magenta

An individual-based simulation model of malaria epidemiology and parasite genetics

ASTMH 2016 pfhrp2/3 modelling

Talk at ASTMH 2016 on malaria pfhrp2/3 deletions. The talk was early discussion of findings now published at eLife1. https://elifesciences.org/articles/25008↩︎